CDS

Accession Number TCMCG016C28607
gbkey CDS
Protein Id OMO50719.1
Location complement(join(<23745..24249,24338..24399,25022..25234,25318..25402,26164..26321,26439..26559,26671..26833,26925..27010,27639..27727,27814..29203,29980..30263))
Organism Corchorus capsularis
locus_tag CCACVL1_30294

Protein

Length 1052aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01016046.1
Definition Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, partial [Corchorus capsularis]
Locus_tag CCACVL1_30294

EGGNOG-MAPPER Annotation

COG_category O
Description Ubiquitin carboxyl-terminal hydrolase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K11855        [VIEW IN KEGG]
EC 3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008233        [VIEW IN EMBL-EBI]
GO:0008234        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016579        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019783        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0036459        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0047484        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070011        [VIEW IN EMBL-EBI]
GO:0070646        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0101005        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901000        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTTCTTGCCGGGGATCTAGGGTTTTCGAGCCTGGTCCTTGTGGTCTCCCTCGTTGTTCCTTTGATCGGCTTGTACATTAGGCGTAAATGGCGACTCTCTGTAGCCAGGCAAGCGGAGATCAAGAGGCTTTTGATTTTGGCCTCCGAGGAGGCCGCCAGGGCGGAGCTTGAGGCCTCGCTGGGATACGGAACTGTGTCAGTGTCGCAGAATTATCACCAATGTGCTGTTTGCTATTGTCCTACCACTACGCGGTGTGCCCGCTGTAAAGCTGTTCGATACTGTTCTGCCAAGTGTCAAATTATTCACTGGCGGCAAGGTCACAAGGAAGAATGTTATCCACCTACCCATACCACAAACCAAAGTCATGATGAGGGAAGTGATTCCAGTCAGCAGCAGGTAGAGCATGGTCAATCTGGAGACAGATATGAGATTGATGAAAAGCAGCATGCAATGCCAACTGAAGCATCCTCCATGATGGAAGCTGCACTGTCTACTCCTACCAGTGCTTCGATTTCACATGAGAAGGATGAAGATATCAAGGTTCTCTACCATGCTGATGGGGATGGAACGAACTCTGTTTCTGAATCTTCCAGTGCTTCATTTTCTGGATTTTCTTCTGCAGCTGGTAGTGATTCATCTGATGATGTCTCTGTGTGTGAGAGCATTAGTTCAAGTGAGCCTGACAAATTGGATACATCTTCAACTGCTGATGCAAACCTTGACATGTTTTGGAGTACTTCTGGTGCTAATGATGTGGATCAAACCAATCCATCATCCCCAAAGTTTGCTAGGTTGGTTGATTCTGTAGATAAATTTTCCAAATTAAATGATTCAAATCAGACAAAGCCCGATCAAAGTGGCCGAAGTCCTTGCAAAACAAATAGTTCTTCAGGTTTGGGCATTAGTGGTTTGAGCGAGGGTTCAACTGCTGAGCATTGTACATTATCTTCTGGTTTTTGGGGCAGAACTCTGGAATCAGTTGCATCTAAAAATGATGATGACAACAAGCCTTTCCAGTCGAACCCTCTAGAAGGCAGTAAACACCCCTCACTTGATTCTGGATCTTCCTTACATTTTTCATTTAATATGTCTGGAGATGCCTCTTCCTCTAACCGACAAGGCCCTGTGGTGAAAGATACCAAATTGGATGATGCTCCTCAGGATGCATTGGGGCATACCAAGCTCTCTGATGGAGTAACATTCTCAAAGAATGCTAGTTTAGATGCTCCAAAAGTCATCAACTCACGTTCCTTGAATTCTGAATGCCCTAACCGTGTGGAGCGTGGTTCTATCAATGTTTCACATGTCCCGAAACCTAGAGAAGCTATCAGTACAGATGTTCCATTAGTCAGTAGCTTGTCATCTACATGCGTTGAAAAGTTAGACTCAGGTGCTGTCATTGATGGCATTAACAATGCTTCTCATCCAAGAAAGTCTGCTGATACTTATTCATCCAGTGCCAGAGTTCATGCTGTTCCTAGTGTGAAATCTGGAAAAATTGATGTTGTCCATGCAAATGCTACATTACCCCAGGTTACAAGTTCTTCTAATGGCAAGCAAGGATTGAAAACCTCTATGTGGAAAGTTGTAGATCAAATCAGAGGATCTAAATTACCTAAACACTATTCCTTCGGAGTTGGGAGTGAGGTTGCTGGAAAATATAGTGATAAGGGGCTTTTCCCTTATGAATCATTTGTCAAGCTTTATAGTTGGAACAAGGTGGAACTTCTACCTTGTGGGCTGGTGAACTGTGGGAATAGTTGTTATGCAAATGCTGTCCTCCAGTGCTTGGCATTTACTCCTCCACTGACTGCTTACTTTCTTCAGGGGCTTCATTCCAAAGCATGTGCAAAGAAAGATTGGTGTTTCACCTGTGAGTTTGAAAGTTTAATTTTGAAGGCTAAGGATGGGAAATCTCCACTGTCACCTATAGGAATACTGTCTCAGCTACAAAATATTGGAAGTCAACTTGCGAATGGGAAAGAGGAAGATGCACATGAATTTTTAAGGTATGCTATTGATGCGATGCAATCTGTTTGTCTTAAAGAAGCTGGGGTGGACTCATCAGGTTGTTCAGAAGAAGAAACGACTTTAATAGGCCTAACTTTTGGAGGCTATCTTCGATCAAAGATAAAGTGCACGAAGTGCCAAGGCAAGTCTGAACGCCATGAAAGAATGATGGACCTTACAGTTGAAATTGAAGGGGACATAGGAACCCTGGAAGAGGCTCTTCGGCGGTTTACTGCGACTGAGATTTTGGATGGAGAAAATAAGTACCAATGTTGCAGATGCAAATCTTACGAGAAGGCCAAAAAGAAGTTGACAATATTAGAGGCTCCAAATGTCCTTACAATTGCTTTGAAGCGATTTCAGTCTGGTAAATTCGGAAAGCTTAATAAAGCAATTCGGTTCCCTGAGATCTTGAACTTGGCACCATATATGAGCGGGACAAGTGATAAATCACCTATATATAGGCTCTATGGGGTGGTGGTCCACTTGGATATTATGAATGCTGCATTTTCGGGTCACTACGTGTGCTATGTGAAAAATTTTCATAACAAGTGGTTCAAGATTGATGACAGCACGGTGACACCTACAGAAGTTGAAAGAGTTCTGACAAAGGGGGCTTACATGCTTCTTTATGCAAGGTGCTCACCTAGGGCCCCAAGATTAATTAGGAGCAGAAATAAGGCCATTCTGTCGAGGGTTAATTCAATGAATATGTCGAAGTCAAGTTCTTTGAGACATTCTAGTGTTGATGGATTTAACCCCAGTTCAGTTTATCCAGATAATCCAGGGAACATTGAATCTTTTTATTCAAAATACAATCGGCTGCAAAGGATTTTAGAAGAGGACTCGTCAAGTGATAGTTCGTCTCTATTTAGCAGTAACTCTGATGAAGGTTCCTGCTGTACTGACAGCACACGAGATTCTACCAGTGCCGATGACTTGTTGGATTCTGTATTTGGTGATTCAATGCGTGGTTGGAACAGCCCCTGGAGGGGCTCCGATTCTGATGCTTCATCATCTTCCTCTTCATCTCCCATTTACTCAAGGCATTCCCCCCTTGCTGATTTAGACCGATATGCTTCTTCGGGTTCACCTGAAACTTGTGGCTCTCAAATGGATTATTCGAATTCAGCTACGGAGGAT
Protein:  
MLLAGDLGFSSLVLVVSLVVPLIGLYIRRKWRLSVARQAEIKRLLILASEEAARAELEASLGYGTVSVSQNYHQCAVCYCPTTTRCARCKAVRYCSAKCQIIHWRQGHKEECYPPTHTTNQSHDEGSDSSQQQVEHGQSGDRYEIDEKQHAMPTEASSMMEAALSTPTSASISHEKDEDIKVLYHADGDGTNSVSESSSASFSGFSSAAGSDSSDDVSVCESISSSEPDKLDTSSTADANLDMFWSTSGANDVDQTNPSSPKFARLVDSVDKFSKLNDSNQTKPDQSGRSPCKTNSSSGLGISGLSEGSTAEHCTLSSGFWGRTLESVASKNDDDNKPFQSNPLEGSKHPSLDSGSSLHFSFNMSGDASSSNRQGPVVKDTKLDDAPQDALGHTKLSDGVTFSKNASLDAPKVINSRSLNSECPNRVERGSINVSHVPKPREAISTDVPLVSSLSSTCVEKLDSGAVIDGINNASHPRKSADTYSSSARVHAVPSVKSGKIDVVHANATLPQVTSSSNGKQGLKTSMWKVVDQIRGSKLPKHYSFGVGSEVAGKYSDKGLFPYESFVKLYSWNKVELLPCGLVNCGNSCYANAVLQCLAFTPPLTAYFLQGLHSKACAKKDWCFTCEFESLILKAKDGKSPLSPIGILSQLQNIGSQLANGKEEDAHEFLRYAIDAMQSVCLKEAGVDSSGCSEEETTLIGLTFGGYLRSKIKCTKCQGKSERHERMMDLTVEIEGDIGTLEEALRRFTATEILDGENKYQCCRCKSYEKAKKKLTILEAPNVLTIALKRFQSGKFGKLNKAIRFPEILNLAPYMSGTSDKSPIYRLYGVVVHLDIMNAAFSGHYVCYVKNFHNKWFKIDDSTVTPTEVERVLTKGAYMLLYARCSPRAPRLIRSRNKAILSRVNSMNMSKSSSLRHSSVDGFNPSSVYPDNPGNIESFYSKYNRLQRILEEDSSSDSSSLFSSNSDEGSCCTDSTRDSTSADDLLDSVFGDSMRGWNSPWRGSDSDASSSSSSSPIYSRHSPLADLDRYASSGSPETCGSQMDYSNSATED